Rie Shimizu-Inatsugi
Table of contents
Research interests
Environmental tolerance of plants, speciation and adaptation by genome duplication (polyploidization), evolution of mating system after polyploidization, evolutionary and ecological genomics.
CV
Education and professional positions
| 2011 - present | Research Associate, Department of Evolutionary Biology and Environmental Studies, University of Zurich, Switzerland |
| 2011 - 2014 | SNF Marie Heim-Vögtlin Programme Research Associate, Institute of Plant Biology, University of Zurich, Switzerland |
| 2006 - 2011 | Institute of Plant Biology, University of Zurich, Switzerland |
| 2004 - 2006 | Postdoctoral fellow, The University of Tokyo, Japan |
| 1997 - 2004 | Graduate studies (Ph.D.) in Biology, The University of Tokyo, Japan |
| 1993 - 1997 | Undergraduate studies (B.Sc.) in Biology, The University of Tokyo, Japan |
Selected publications
- Shimizu-Inatsugi R., Terada A., Hirose K., Kudoh H., Sese J., Shimizu KK. (2016). Plant adaptive radiation mediated by polyploid plasticity in transcriptomes. Molecular Ecology:1-35. DOI: 10.1111/mec.13738
- Mizukami AG.*, Inatsugi R.*, Jiao J., Kotake T., Kuwata K., Ootani K., Okuda S., Sankaranarayanan S., Sato Y., Maruyama D., Iwai H. Garénaux E., Sato C., Kitajima K., Tsumuraya Y., Mori H., Yamaguchi J., Itami K., Sasaki N., Higashiyama T. (* co-first author) (2016). The AMOR Arabinogalactan Sugar Chain Induces Pollen-Tube Competency to Respond to Ovular Guidance. Current Biology. DOI: 10.1016/j.cub.2016.02.040
- Akama S.*, Shimizu-Inatsugi R.*, Shimizu KK., Sese J. (* equally contributed) (2014). Genome-wide quantification of homeolog expression ratio revealed non-stochastic gene regulation in synthetic allopolyploid Arabidopsis. Nucleic Acids Research. DOI: 10.1093/nar/gkt1376
- Tsuchimatsu T., Suwabe K., Shimizu-Inatsugi R., Isokawa S., Pavlidis P., Stadler T., Suzuki G., Takayama S., Watanabe M., Shimizu KK. (2010). Evolution of self-compatibility in Arabidopsis by a mutation in the male specificity gene. Nature 464(7293): 1342-1346. DOI: 10.1038/nature08927
- Shimizu-Inatsugi R., Lihova J., Iwanaga H., Kudoh H., Marhold K., Savolainen O., Watanabe K., Yakubov VV., Shimizu KK. (2009). The allopolyploid Arabidopsis kamchatica originated from multiple individuals of Arabidopsis lyrata and Arabidopsis halleri. Mol Ecol 18(19): 4024-4048. DOI: 10.1111/j.1365-294X.2009.04329.x
