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Packages that use UnmodifiableMap | |
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sbrt.ext.cplex | Provides a class that allows communication with CPLEX. |
sbrt.kernel.fba | Provides classes and interfaces for creating objects relevant to Flux Balance Analysis. |
sbrt.kernel.fba.comp | Provides classes and interfaces for performing Flux Balance Analysis computations. |
sbrt.kernel.math | Provides classes and interfaces for creating objects relevant to mathematics. |
sbrt.kernel.math.geom.comp | Provides classes and interfaces for performing geometry-related computations. |
sbrt.shell | Provides classes used by shell-level software. |
sbrt.shell.io | Provides classes and interfaces for reading and writing files. |
sbrt.shell.io.fba | Provides classes and interfaces for reading and writing files relevant to Flux Balance Analysis. |
sbrt.shell.mng.fba | Provides classes and interfaces for creating Flux Balance Analysis process managers. |
sbrt.shell.mng.stat | Provides classes and interfaces for creating statistical process managers. |
Uses of UnmodifiableMap in sbrt.ext.cplex |
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Methods in sbrt.ext.cplex that return UnmodifiableMap | |
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UnmodifiableMap<C,java.lang.Double> |
CplexSolver.getSolutionVector()
Returns the most recently computed solution vector. |
Uses of UnmodifiableMap in sbrt.kernel.fba |
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Methods in sbrt.kernel.fba that return UnmodifiableMap | |
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UnmodifiableMap<MathExpr<java.lang.String>,Interval> |
FluxConstraints.getExprConstraints()
Returns the constraints for mathematical expressions of fluxes. |
UnmodifiableMap<java.lang.String,Interval> |
FluxConstraints.getFluxConstraints()
Returns the flux constraints for single reactions. |
Uses of UnmodifiableMap in sbrt.kernel.fba.comp |
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Methods in sbrt.kernel.fba.comp that return UnmodifiableMap | |
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UnmodifiableMap<java.lang.String,java.lang.Double> |
InvalidFluxVectorException.getFluxVector()
Returns the invalid flux vector; |
Uses of UnmodifiableMap in sbrt.kernel.math |
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Methods in sbrt.kernel.math that return UnmodifiableMap | |
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UnmodifiableMap<?,?> |
InvalidPointException.getPoint()
Returns the invalid point. |
Uses of UnmodifiableMap in sbrt.kernel.math.geom.comp |
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Methods in sbrt.kernel.math.geom.comp that return UnmodifiableMap | |
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UnmodifiableMap<V,java.lang.Double> |
CdHarComputer.Results.getPoint()
Returns the random interior point that was computed. |
Uses of UnmodifiableMap in sbrt.shell |
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Fields in sbrt.shell declared as UnmodifiableMap | |
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static UnmodifiableMap<java.lang.String,java.lang.String> |
ProgramSolverFactory.nameClassMap
The correspondence between the strings used to denote a particular program solver and the name of the actual class it represents. |
Uses of UnmodifiableMap in sbrt.shell.io |
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Methods in sbrt.shell.io that return UnmodifiableMap | |
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UnmodifiableMap<K,V> |
RomiFile.getMap()
Returns the map contained in this file. |
Uses of UnmodifiableMap in sbrt.shell.io.fba |
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Methods in sbrt.shell.io.fba that return UnmodifiableMap | |
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UnmodifiableMap<java.lang.String,java.util.Set<LinearComb<java.lang.String>>> |
FluxCapInputFile.getFluxCaps()
Returns the flux caps contained in this file. |
Uses of UnmodifiableMap in sbrt.shell.mng.fba |
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Methods in sbrt.shell.mng.fba that return UnmodifiableMap | |
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static UnmodifiableMap<java.lang.String,java.util.Set<LinearComb<java.lang.String>>> |
MsFluxIntervalManager.getFluxCaps(ManagerInput<java.lang.String,java.lang.String> input,
java.io.PrintWriter out,
Fluxome fluxome)
Returns the flux caps contained in the file with the name specified by MsFluxIntervalManager.FLUX_CAP_FILE in the provided input. |
Uses of UnmodifiableMap in sbrt.shell.mng.stat |
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Methods in sbrt.shell.mng.stat that return UnmodifiableMap | |
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static UnmodifiableMap<java.lang.String,java.lang.Double> |
CorrelationManager.getVector(java.lang.String fileName)
Parses the file with the provided name and returns the vector it contains. |
static UnmodifiableMap<java.lang.String,java.lang.Double> |
CorrelationManager.getVector(java.lang.String fileName,
java.io.PrintWriter out)
Parses the file with the provided name, prints a status message to the provided print writer, and returns the vector the file contains. |
static UnmodifiableMap<java.lang.String,java.lang.Double> |
CorrelationManager.getXValues(ManagerInput<java.lang.String,java.lang.String> input,
java.io.PrintWriter out)
Returns the parsed value for CorrelationManager.X_FILE_NAME in the provided input
and prints a descriptive message to the provided print writer. |
static UnmodifiableMap<java.lang.String,java.lang.Double> |
CorrelationManager.getYValues(ManagerInput<java.lang.String,java.lang.String> input,
java.io.PrintWriter out)
Returns the parsed value for CorrelationManager.Y_FILE_NAME in the provided input
and prints a descriptive message to the provided print writer. |
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