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FBA System Solver
This process is used to solve the equation Sv = 0, where S denotes a stoichiometry matrix and v denotes a vector of all fluxes. The stoichiometry matrix is constructed from a provided stoichiometric network, and Mathematica is used to solve the corresponding system of linear equations. See the SBRT's Mathematica documentation for additional information. Here is the set of keywords this process understands, along with a description of their possible corresponding values. See the command line documentation for more information about keyword-value pairs. |
Required Keywords | Possible Values |
Process | FBA System Solver |
Reaction File | The name of the FBA Reaction File containing the chemical reactions. |
Kernel Link Command | The command used to link to the Mathematica kernel. See the Mathematica documentation for additional information. |
Output File Name | The desired name of the output file. See Linear System Solution Files for further information. |
ExamplesClick here for an example. |