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java.lang.Objectsbrt.kernel.fba.proc.NetworkInfoProcess.Results<F>
F
- the fluxome type.public static class NetworkInfoProcess.Results<F extends CatalyzedFluxome>
This class is used to represent the information gathered about a fluxome.
Method Summary | |
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java.util.Map<java.lang.String,java.util.Set<java.lang.String>> |
getCatalystRxnAssoc()
Returns the catalyst-reaction associations contained in the fluxome. |
java.util.Set<java.lang.String> |
getCatalysts()
Returns the catalysts contained in the fluxome. |
java.util.Set<java.lang.String> |
getChemSpecies()
Returns the metabolites contained in the fluxome. |
java.util.Collection<java.util.Set<java.lang.String>> |
getEquivRxns()
Returns the equivalent reactions contained in the fluxome. |
java.util.Set<java.lang.String> |
getRxnNames()
Returns the names of all reactions contained in the fluxome. |
SparseDoubleMatrix<java.lang.String,java.lang.String> |
getStoichMatrix()
Returns the stoichiometry matrix of the fluxome. |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Method Detail |
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public java.util.Set<java.lang.String> getChemSpecies()
public java.util.Set<java.lang.String> getRxnNames()
public java.util.Set<java.lang.String> getCatalysts()
public java.util.Collection<java.util.Set<java.lang.String>> getEquivRxns()
public java.util.Map<java.lang.String,java.util.Set<java.lang.String>> getCatalystRxnAssoc()
public SparseDoubleMatrix<java.lang.String,java.lang.String> getStoichMatrix()
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