Uses of Class
sbrt.shell.ApplicationException

Packages that use ApplicationException
sbrt.shell Provides classes used by shell-level software. 
sbrt.shell.mng.algebra Provides classes for creating algebra process managers. 
sbrt.shell.mng.fba Provides classes and interfaces for creating Flux Balance Analysis process managers. 
sbrt.shell.mng.geom Provides classes and for creating geometry process managers. 
sbrt.shell.mng.stat Provides classes and interfaces for creating statistical process managers. 
sbrt.shell.text Provides classes and interfaces for defining formats for basic objects. 
 

Uses of ApplicationException in sbrt.shell
 

Methods in sbrt.shell that return ApplicationException
static ApplicationException ProgramSolverFactory.interpret(ProgramSolverException e)
          Interprets a program solver exception and returns a corresponding application exception.
 

Uses of ApplicationException in sbrt.shell.mng.algebra
 

Methods in sbrt.shell.mng.algebra that return ApplicationException
static ApplicationException LinearSolverManager.interpret(ExternalSoftwareException e)
          Interprets the provided external software exception.
 

Uses of ApplicationException in sbrt.shell.mng.fba
 

Methods in sbrt.shell.mng.fba that return ApplicationException
static ApplicationException CvRxnDeletionManager.interpret(ConflictingInputException e, java.lang.String fileName1, java.lang.String fileName2)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException FbaOptManager.interpret(ConstraintViolationException e, FbaProcess<?,?> process)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarFluxVectorManager.interpret(DimensionException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarFluxVectorManager.interpret(ExceededLimitException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException FbaOptManager.interpret(FbaOptException e, FbaProcess<?,?> process)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException InitialPointManager.interpret(FbaOptException e, FbaProcess<?,?> process)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException MsFluxIntervalManager.interpret(FluxRangeException e, FbaProcess<?,?> process)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException SimpleFluxIntervalManager.interpret(IllegalBoundsException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarFluxVectorManager.interpret(InfeasibleSolutionException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarFluxVectorManager.interpret(InvalidFluxVectorException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException FbaOptManager.interpret(ProgramSolverException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarFluxVectorManager.interpret(java.lang.RuntimeException e)
          Attempts to interpret the provided RuntimeException.
static ApplicationException FbaOptManager.interpret(java.lang.RuntimeException e, FbaProcess<?,?> process)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarFluxVectorManager.interpret(UnboundedVariableException e)
          Returns an ApplicationException whose message describes the error that ocurred.
 

Uses of ApplicationException in sbrt.shell.mng.geom
 

Methods in sbrt.shell.mng.geom that return ApplicationException
static ApplicationException CdHarManager.interpret(ExceededLimitException e)
          Returns an ApplicationException whose message describes the error that ocurred.
static ApplicationException CdHarManager.interpret(UnboundedVariableException e)
          Returns an ApplicationException whose message describes the error that ocurred.
 

Uses of ApplicationException in sbrt.shell.mng.stat
 

Methods in sbrt.shell.mng.stat that return ApplicationException
static ApplicationException CorrelationManager.interpret(JriException e)
          Wraps the provided JRI exception as an application exception.
 

Uses of ApplicationException in sbrt.shell.text
 

Subclasses of ApplicationException in sbrt.shell.text
 class FormatException
          This exception type is used to indicate a formatting error has ocurred.