> User's Guide
Program Solvers

Two program solvers are currently supported by the Systems Biology Research Tool: the GNU Linear Programming Kit (GLPK) and CPLEX. The strings GLPK and CPLEX must be used to denote the name of the program solver when one is required.

GLPK is packaged with the Systems Biology Research Tool, so separate installation should not be required. If a problem is encountered with GLPK, please consult the external software downloads page for more information.

To use CPLEX, place cplex.jar and the appropriate shared object file in the SBRT's lib directory.



Text Formats Brief Descriptions
Optimization Senses The format of optimization senses.
Files Brief Descriptions
Program Solver Parameter Files Used to store parameters for linear program solvers.