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Flux Cap
Identification
This process is used to identify all of the flux caps in a stoichiometric network. All reactions in the provided network must be irreversible, or else an error will be reported. This process requires the set of all steady state cycles within the provided reaction network, which can be generated using one of the cycle identification processes. The output of a cycle identification process can be used directly as input to this process. Here is the set of keywords this process understands, along with a description of their possible corresponding values. |
Required Keywords | Possible Values |
Process | FBA Flux Cap Identification |
Reaction File | The name of an FBA Reaction File containing a stoichiometric network. |
Cycle File | The name of a file containing all cycles in the specified stoichiometric network. See Multiple-Flux Vectors Files for further information. |
Output File Name | The name of the file to which the flux caps will be written. See Flux Cap Files for further information. |
ExamplesClick here for an example. |