Uses of Class
sbrt.kernel.math.optimization.OptimizationSense

Packages that use OptimizationSense
sbrt.ext.cplex Provides a class that allows communication with CPLEX. 
sbrt.ext.glpk Provides a class that allows communication with GLPK. 
sbrt.kernel.fba.comp Provides classes and interfaces for performing Flux Balance Analysis computations. 
sbrt.kernel.fba.proc Provides classes and interfaces for executing Flux Balance Analysis processes. 
sbrt.kernel.math.optimization Provides classes and interfaces for creating objects relevant to solving optimization problems. 
sbrt.shell.mng.fba Provides classes and interfaces for creating Flux Balance Analysis process managers. 
sbrt.shell.text.math Provides classes and interfaces for defining formats for mathematical objects. 
 

Uses of OptimizationSense in sbrt.ext.cplex
 

Methods in sbrt.ext.cplex with parameters of type OptimizationSense
 void CplexSolver.setObjectiveFunction(LinearComb<? extends C> objective, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void CplexSolver.setObjectiveFunction(MathExpr<? extends C> objective, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void CplexSolver.setObjectiveFunction(QuadraticExpr<? extends C> objective, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void CplexSolver.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense.
 

Uses of OptimizationSense in sbrt.ext.glpk
 

Methods in sbrt.ext.glpk with parameters of type OptimizationSense
 void GlpkSolver.setObjectiveFunction(LinearComb<? extends C> expression, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void GlpkSolver.setObjectiveFunction(MathExpr<? extends C> expression, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void GlpkSolver.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense.
 

Uses of OptimizationSense in sbrt.kernel.fba.comp
 

Methods in sbrt.kernel.fba.comp that return OptimizationSense
 OptimizationSense RxnDeletionComputer.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense FbaOptException.getSense()
          Returns the sense, or direction, of the attempted optimization.
 

Methods in sbrt.kernel.fba.comp with parameters of type OptimizationSense
 FbaOptComputer.Results FbaOptComputer.getOptimal(MathExpr<?> objective, OptimizationSense sense)
          Returns the results of computing the optimal value of the provided objective function.
 FbaOptComputer.Results FbaOptComputer.getOptimal(java.lang.String reactionName, OptimizationSense sense)
          Returns the results of computing the optimal flux of the reaction with the provided name.
 void RxnDeletionComputer.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 

Constructors in sbrt.kernel.fba.comp with parameters of type OptimizationSense
FbaOptException(MathExpr<?> objectiveFunction, OptimizationSense sense, ProgramSolverStatus status)
          Constructs a new FBA optimization exception.
FbaOptException(MathExpr<?> objectiveFunction, OptimizationSense sense, ProgramSolverStatus status, java.lang.String message)
          Constructs a new FBA optimization exception.
 

Uses of OptimizationSense in sbrt.kernel.fba.proc
 

Methods in sbrt.kernel.fba.proc that return OptimizationSense
 OptimizationSense CvFbaOptimizationExperiment.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense ObjectiveFunctionAnalysis.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense CatalystDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense RxnDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense CvRxnDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense StoichVariationProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense CvObjectiveFunctionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense FbaOptimizationProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptimizationSense CvCatalystDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 

Methods in sbrt.kernel.fba.proc with parameters of type OptimizationSense
 void CvFbaOptimizationExperiment.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void ObjectiveFunctionAnalysis.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void CatalystDeletionProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void RxnDeletionProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void CvRxnDeletionProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void StoichVariationProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void CvObjectiveFunctionProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void FbaOptimizationProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 void CvCatalystDeletionProcess.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense to the provided value.
 

Uses of OptimizationSense in sbrt.kernel.math.optimization
 

Methods in sbrt.kernel.math.optimization that return OptimizationSense
static OptimizationSense OptimizationSense.valueOf(java.lang.String name)
          Returns the enum constant of this type with the specified name.
static OptimizationSense[] OptimizationSense.values()
          Returns an array containing the constants of this enum type, in the order they're declared.
 

Methods in sbrt.kernel.math.optimization with parameters of type OptimizationSense
 void LinearProgramSolver.setObjectiveFunction(LinearComb<? extends C> expression, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void ProgramSolver.setObjectiveFunction(MathExpr<? extends C> expression, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void QuadraticProgramSolver.setObjectiveFunction(QuadraticExpr<? extends C> expression, OptimizationSense sense)
          Sets the objective function and optimization sense to the provided values.
 void ProgramSolver.setOptimizationSense(OptimizationSense sense)
          Sets the optimization sense.
 

Uses of OptimizationSense in sbrt.shell.mng.fba
 

Methods in sbrt.shell.mng.fba that return OptimizationSense
static OptimizationSense FbaOptManager.getOptimizationSense(ManagerInput<java.lang.String,java.lang.String> input)
          Parses and returns the value for FbaOptManager.OPTIMIZATION_SENSE in the provided manager input.
 

Uses of OptimizationSense in sbrt.shell.text.math
 

Methods in sbrt.shell.text.math with type parameters of type OptimizationSense
<S extends OptimizationSense>
java.lang.String
SenseFormat.format(S obj)
          Returns a formatted string representation of the provided optimization sense.
 

Methods in sbrt.shell.text.math that return OptimizationSense
 OptimizationSense SenseFormat.parse(java.lang.String source)
          Parses the provided string and returns its corresponding object.