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Packages that use RevExchRxn | |
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sbrt.kernel.fba | Provides classes and interfaces for creating objects relevant to Flux Balance Analysis. |
sbrt.kernel.fba.proc | Provides classes and interfaces for executing Flux Balance Analysis processes. |
sbrt.shell.text.fba | Provides classes and interfaces for defining formats for objects relevant to Flux Balance Analysis. |
Uses of RevExchRxn in sbrt.kernel.fba |
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Methods in sbrt.kernel.fba with parameters of type RevExchRxn | |
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static boolean |
RxnComparer.equivRevExchRxns(RevExchRxn rxn1,
RevExchRxn rxn2)
Indicates if the provided reversible exchange reactions are stoichiometrically equivalent. |
Method parameters in sbrt.kernel.fba with type arguments of type RevExchRxn | ||
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static
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RxnComparer.getEquivRevExchRxnIds(java.util.Map<T,RevExchRxn> rxns)
Returns a collection of sets of the names of stoichiometrically equivalent reactions contained in the provided map. |
Uses of RevExchRxn in sbrt.kernel.fba.proc |
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Methods in sbrt.kernel.fba.proc with parameters of type RevExchRxn | |
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java.util.Map<java.lang.String,ExchangeRxn> |
RevRxnBreakerProcess.breakRxn(java.lang.String rxnId,
RevExchRxn rxn)
Breaks a reversible exchange reaction into a pair of irreversible source and sink exchange reactions. |
Uses of RevExchRxn in sbrt.shell.text.fba |
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Methods in sbrt.shell.text.fba with parameters of type RevExchRxn | |
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java.lang.String |
RevRxnFormatV1.format(RevExchRxn rxn)
Returns a formatted string representation of the provided source. |
java.lang.String |
RxnFormatV1.format(RevExchRxn rxn)
Returns a formatted string representation of the provided reversible exchange reaction. |
java.lang.String |
RevRxnFormatV2.format(RevExchRxn rxn)
Returns a formatted string representation of the provided source. |
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