sbrt.kernel.fba.proc
Class AbstractCvFbaOptProcess<F extends Fluxome,R>
java.lang.Object
sbrt.kernel.fba.proc.FbaProcess<F,R>
sbrt.kernel.fba.proc.AbstractCvFbaOptProcess<F,R>
- Type Parameters:
F
- the fluxome type.R
- the results type.
- All Implemented Interfaces:
- KernelProcess<R>
- Direct Known Subclasses:
- CvFluxIntervalProcess, SvCdHarFluxVectorProcess, SvInitialPointProcess
public abstract class AbstractCvFbaOptProcess<F extends Fluxome,R>
- extends FbaProcess<F,R>
This class is used to represent constraint-variation Flux Balance Analysis
processes. It offers two static methods to aid in this sort of process.
- Author:
- This class was written and documented by Jeremiah Wright
while in the Wagner lab.
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
AbstractCvFbaOptProcess
public AbstractCvFbaOptProcess()
setConstraints
public static void setConstraints(FluxConstraints constraints,
FluxCvComputer<?> computer)
- Sets the provided constraints in the provided constraint-variation
computer.
- Parameters:
constraints
- the set of flux constraints.computer
- the computer in which to set the provided constraints.
restoreConstraints
public static void restoreConstraints(FluxConstraints constraints,
FluxCvComputer<?> computer)
- Restores the provided constraints in the provided constraint-variation
computer.
- Parameters:
constraints
- the set of flux constraints to be restored.computer
- the computer in which to restore the provided
constraints.