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java.lang.Objectsbrt.shell.proc.graph_theory.RedundantCycleRemoval
public class RedundantCycleRemoval
This class is used
Constructor Summary | |
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RedundantCycleRemoval(java.lang.String sbmlFileName)
Constructs a new SBML file reader. |
Method Summary | |
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void |
writeFluxBounds(java.lang.String fluxBoundsFileName)
Writes the flux bounds contained in the SBML file to a file with the provided name. |
void |
writeFluxVector(java.lang.String fluxVectorFileName)
Writes the flux vector contained in the SBML file to a file with the provided name. |
void |
writeGenes(java.lang.String geneFileName)
Writes the genes contained in the SBML file to a file with the provided name. |
void |
writeRxns(java.lang.String rxnFileName)
Writes the reactions contained in the SBML file to a file with the provided name. |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public RedundantCycleRemoval(java.lang.String sbmlFileName)
sbmlFileName
- the name of the SBML file to be read.Method Detail |
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public void writeRxns(java.lang.String rxnFileName)
rxnFileName
- the name of the file to generated.public void writeGenes(java.lang.String geneFileName)
geneFileName
- the name of the file to generated.public void writeFluxVector(java.lang.String fluxVectorFileName)
fluxVectorFileName
- the name of the file to generated.public void writeFluxBounds(java.lang.String fluxBoundsFileName)
fluxBoundsFileName
- the name of the file to generated.
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