Serialized Form


Package sbrt

Class sbrt.FatalException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L


Package sbrt.ext

Class sbrt.ext.ExternalSoftwareException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L


Package sbrt.ext.mma

Class sbrt.ext.mma.MathematicaException extends ExternalSoftwareException implements Serializable

serialVersionUID: 1L

Serialized Fields

cause

com.wolfram.jlink.MathLinkException cause

Package sbrt.ext.R

Class sbrt.ext.R.JriException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L


Package sbrt.kernel.fba.comp

Class sbrt.kernel.fba.comp.FbaOptException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

objectiveFunction

MathExpr<V> objectiveFunction

sense

OptSense sense

status

ProgramSolverStatus status

Class sbrt.kernel.fba.comp.FluxCapException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

fluxCap

MathExpr<V> fluxCap

reactionName

java.lang.String reactionName

Class sbrt.kernel.fba.comp.FluxRangeException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

rangeCutoff

double rangeCutoff

offender

java.lang.Object offender

Class sbrt.kernel.fba.comp.InvalidFluxVectorException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

fluxVector

UnmodifiableMap<K,V> fluxVector

tolerance

double tolerance

Package sbrt.kernel.io

Class sbrt.kernel.io.ConflictingInputException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

conflicts

UnmodifiableList<E> conflicts

Package sbrt.kernel.math

Class sbrt.kernel.math.ConstraintViolationException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

variable

java.lang.Object variable

bounds

Interval bounds

violatingValue

java.lang.Number violatingValue

Class sbrt.kernel.math.ExceededLimitException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Class sbrt.kernel.math.IllegalBoundsException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

obj

java.lang.Object obj

lower

java.lang.Number lower

upper

java.lang.Number upper

Class sbrt.kernel.math.InfeasibleSolutionException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

direction

java.lang.Object direction

Class sbrt.kernel.math.Interval extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

lowerBound

double lowerBound

upperBound

double upperBound

Class sbrt.kernel.math.InvalidPointException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

point

UnmodifiableMap<K,V> point

Class sbrt.kernel.math.MissingVariableException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

variable

java.lang.Object variable

Class sbrt.kernel.math.UnboundedVariableException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

variable

java.lang.Object variable

Package sbrt.kernel.math.algebra

Class sbrt.kernel.math.algebra.IllegalFreeVariableException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

variable

java.lang.Object variable

Package sbrt.kernel.math.geom

Class sbrt.kernel.math.geom.DimensionException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L

Serialized Fields

dimension

int dimension

Package sbrt.kernel.math.optimization

Class sbrt.kernel.math.optimization.ProgramSolverException extends ExternalSoftwareException implements Serializable

serialVersionUID: 1L


Package sbrt.shell

Class sbrt.shell.ApplicationException extends java.lang.RuntimeException implements Serializable

serialVersionUID: 1L


Package sbrt.shell.gui

Class sbrt.shell.gui.SbrtOutputPane extends javax.swing.JTextPane implements Serializable

serialVersionUID: 1L

Serialized Fields

plainWriter

java.io.PrintWriter plainWriter

errorWriter

java.io.PrintWriter errorWriter

sectionBreakWriter

java.io.PrintWriter sectionBreakWriter

Class sbrt.shell.gui.TextPaneGui extends javax.swing.JPanel implements Serializable

serialVersionUID: -89245306682693526L

Serialized Fields

outputPane

SbrtOutputPane outputPane

workingDirButton

javax.swing.JButton workingDirButton

executeButton

javax.swing.JButton executeButton

helpLink

javax.swing.JButton helpLink

fc

javax.swing.JFileChooser fc

dc

javax.swing.JFileChooser dc

Package sbrt.shell.io

Class sbrt.shell.io.EndOfFile extends java.lang.Object implements Serializable

serialVersionUID: 0L


Package sbrt.shell.text

Class sbrt.shell.text.FormatException extends ApplicationException implements Serializable

serialVersionUID: 1L