Uses of Interface
sbrt.kernel.fba.comp.FluxCvComputer

Packages that use FluxCvComputer
sbrt.kernel.fba.comp Provides classes and interfaces for performing Flux Balance Analysis computations. 
sbrt.kernel.fba.proc Provides classes and interfaces for executing Flux Balance Analysis processes. 
 

Uses of FluxCvComputer in sbrt.kernel.fba.comp
 

Subinterfaces of FluxCvComputer in sbrt.kernel.fba.comp
 interface FluxIntervalComputer<F extends Fluxome>
          This interface is used to represent flux interval computers.
 

Classes in sbrt.kernel.fba.comp that implement FluxCvComputer
 class AbstractCvComputer<F extends Fluxome>
          This abstract class is a skeleton implementation of FluxCvComputer.
 class AbstractFluxIntervalComputer<F extends Fluxome>
          This abstract class is a skeleton implemenation of FluxIntervalComputer.
 class CdHarFluxComp<F extends Fluxome>
          This class is used to compute randomly distributed vectors within flux space.
 class FbaOptimizer<F extends Fluxome>
          This class is the workhorse of all Flux Balance Analysis optimizations.
 class InitialPointComputer<F extends Fluxome>
          This class is used to compute initial points for coordinate-direction hit-and-run random flux vector algorithms.
 class MsFluxIntervalComputer<F extends IrrevRxnFluxome>
          This class is used to compute Mahadevan-Schilling flux intervals.
 class ReverseRxnIntervalComp<F extends IrrevRxnFluxome>
          This class is used to compute flux intervals while constraining the fluxes of reverse reactions to their minimum.
 class RxnDeletionComputer<F extends Fluxome>
          This class is used to compute the effect of deleting reactions in a fluxome.
 class SimpleFluxIntervalComputer<F extends Fluxome>
          This class is used to compute flux intervals in the simplest possible way.
 

Uses of FluxCvComputer in sbrt.kernel.fba.proc
 

Methods in sbrt.kernel.fba.proc with parameters of type FluxCvComputer
static void AbstractCvFbaOptProcess.restoreConstraints(FluxConstraints constraints, FluxCvComputer<?> computer)
          Restores the provided constraints in the provided constraint-variation computer.
static void AbstractCvFbaOptProcess.setConstraints(FluxConstraints constraints, FluxCvComputer<?> computer)
          Sets the provided constraints in the provided constraint-variation computer.