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Description
Interface Summary | |
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CatalyzedFluxome | This interface is used to represent fluxomes with catalyzed reactions. |
ChemRxn | This interface is used to represent chemical reactions. |
ExchangeRxn | This interface is used to represent exchange reactions. |
Fluxome | This interface is used to represent fluxomes for use in Flux Balance Analysis. |
IrrevRxnFluxome | This interface is used to represent fluxomes that contain only irreversible reactions. |
MixedFluxome | This interface is used to represent fluxomes that contain multiple types of chemical reactions. |
Class Summary | |
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AbstractExchangeRxn | This class is a skeleton implementation of ExchangeRxn . |
AbstractRxn | This class is a skeleton implementation of ChemicalRxn. |
FluxConstraints | This class is used to group sets of flux constraints. |
IrrevRxn | This class is used to represent irreversible chemical reactions. |
IrrevRxnFluxomeV1 | This class is a concrete implementation of IrrevRxnFluxome . |
MixedFluxomeV1 | This class is a concrete implementation of MixedFluxome . |
RevExchRxn | This class is used to represent reversible exchange reactions, that is, exchange reactions that can both supply and consume chemical species to and from a chemical system. |
RevRxn | This class is used to represent reversible chemical reactions. |
RxnComparer | This class is used to compare chemical reactions. |
SinkRxn | This class is used to represent exchange reactions that transport chemicals from a chemical system to its surroundings. |
SourceRxn | This class is used to represent exchange reactions that transport chemicals to a chemical system from its surroundings. |
Provides classes and interfaces for creating objects relevant to Flux Balance Analysis.
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