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java.lang.Objectsbrt.kernel.fba.proc.FbaProcess<IrrevRxnFluxome,java.util.Map<java.lang.String,java.util.Set<LinearComb<java.lang.String>>>>
sbrt.kernel.fba.proc.FluxCapProcess
public final class FluxCapProcess
This class is used to perform a flux cap identification. It simply adds the results of a FluxCapComputer to a ResultsManager.
Constructor Summary | |
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FluxCapProcess(FluxCapComputer computer)
Constructs a new flux cap process. |
Method Summary | |
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IrrevRxnFluxome |
getFluxome()
Returns the fluxome for which flux caps are computed. |
ProgressMonitor |
getProgress()
Returns a progress monitor for this process. |
void |
run(ResultsManager<java.util.Map<java.lang.String,java.util.Set<LinearComb<java.lang.String>>>> resultsManager)
Computes the flux caps and adds the result to the provided manager. |
Methods inherited from class sbrt.kernel.fba.proc.FbaProcess |
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toString |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public FluxCapProcess(FluxCapComputer computer)
computer
- the computer with which all flux caps will be computed.Method Detail |
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public IrrevRxnFluxome getFluxome()
getFluxome
in class FbaProcess<IrrevRxnFluxome,java.util.Map<java.lang.String,java.util.Set<LinearComb<java.lang.String>>>>
public void run(ResultsManager<java.util.Map<java.lang.String,java.util.Set<LinearComb<java.lang.String>>>> resultsManager)
run
in interface KernelProcess<java.util.Map<java.lang.String,java.util.Set<LinearComb<java.lang.String>>>>
resultsManager
- the results manager to which the flux cap-results
will be added.public ProgressMonitor getProgress()
getProgress
in interface MonitoredProcess<java.util.Map<java.lang.String,java.util.Set<LinearComb<java.lang.String>>>>
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