Uses of Package
sbrt.kernel.fba.proc

Packages that use sbrt.kernel.fba.proc
sbrt.kernel.fba.proc Provides classes and interfaces for executing Flux Balance Analysis processes. 
sbrt.shell.mng.fba Provides classes and interfaces for creating Flux Balance Analysis process managers. 
 

Classes in sbrt.kernel.fba.proc used by sbrt.kernel.fba.proc
AbstractCvFbaOptProcess
          This class is used to represent constraint-variation Flux Balance Analysis processes.
FbaProcess
          This abstract class is used to represent Flux Balance Analysis processes.
FluxActivityProcess.Results
          This class is used to represent the results of a flux activity process.
FluxPlasticityProcess.Results
          This class is used to represent the results of a flux plasticity process.
NetworkInfoProcess.Results
          This class is used to represent the information gathered about a fluxome.
 

Classes in sbrt.kernel.fba.proc used by sbrt.shell.mng.fba
CatalystDeletionProcess
          This class is used to perform catalyst deletion processes.
CdHarFluxVectorProcess
          This class is used to perform coordinate direction hit-and-run flux vector processes.
CvCatalystDeletionProcess
          This class is used to perform constraint-variation catalyst deletion processes.
CvFbaOptProcess
          This class is used to perform constraint-variation FBA optimization processes.
CvFluxIntervalProcess
          This class is used to perform constraint variation flux interval processes.
CvObjectiveFunctionProcess
          This class is used to perform constraint-variation objective function processes.
CvRxnDeletionProcess
          This class is used to perform constraint-variation reaction deletion processes.
CycleIdProcess
          This class is used to execute steady state cycle identification processes.
ExtremeCurrentProcess
          This class is used to identify the extreme currents in stoichiometric networks.
FbaOptProcess
          This class is used to perform a basic Flux Balance Analysis optimization.
FbaProcess
          This abstract class is used to represent Flux Balance Analysis processes.
FbaSolverProcess
          This class is used to solve the equation Sv = 0.
FluxActivityProcess
          This class is used to analyze the activity of fluxes.
FluxCapProcess
          This class is used to perform a flux cap identification.
FluxIntervalProcess
          This class is used to perform flux interval computations.
FluxomeReducerProcess
          This class is used to execute fluxome reduction processes.
FluxPlasticityProcess
          This class is used to analyze the plasticity of fluxes.
InitialPointGenerator
          This class is used to execute initial point generators.
NetworkInfoProcess
          This class is used to gather basic information about a fluxome.
ObjFunAnalysis
          This class is used to perform objective function analyses.
RandConstGeneratorV1
          This class is used to generate random flux constraints.
RandomObjectiveGenerator
          This class is used to generate random objective functions.
RedundRxnRemoverProcess
          This class is used to remove redundant reactions from a fluxome.
RevRxnBreakerProcess
          This class is used to break reversible reactions into pairs of irreversible reactions.
RxnDeletionProcess
          This class is used to perform reaction deletion processes.