Uses of Class
sbrt.kernel.math.optimization.OptSense

Packages that use OptSense
sbrt.ext.cplex Provides a class that allows communication with CPLEX. 
sbrt.ext.glpk Provides a class that allows communication with GLPK. 
sbrt.kernel.fba.comp Provides classes and interfaces for performing Flux Balance Analysis computations. 
sbrt.kernel.fba.proc Provides classes and interfaces for executing Flux Balance Analysis processes. 
sbrt.kernel.math.optimization Provides classes and interfaces for creating objects relevant to solving optimization problems. 
sbrt.shell.mng.fba Provides classes and interfaces for creating Flux Balance Analysis process managers. 
sbrt.shell.text.math Provides classes and interfaces for defining formats for mathematical objects. 
 

Uses of OptSense in sbrt.ext.cplex
 

Methods in sbrt.ext.cplex with parameters of type OptSense
 void CplexSolver.setObjectiveFunction(LinearComb<? extends C> objective, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void CplexSolver.setObjectiveFunction(MathExpr<? extends C> objective, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void CplexSolver.setObjectiveFunction(QuadraticExpr<? extends C> objective, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void CplexSolver.setOptimizationSense(OptSense sense)
          Sets the optimization sense.
 

Uses of OptSense in sbrt.ext.glpk
 

Methods in sbrt.ext.glpk with parameters of type OptSense
 void GlpkSolver.setObjectiveFunction(LinearComb<? extends C> expression, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void GlpkSolver.setObjectiveFunction(MathExpr<? extends C> expression, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void GlpkSolver.setOptimizationSense(OptSense sense)
          Sets the optimization sense.
 

Uses of OptSense in sbrt.kernel.fba.comp
 

Methods in sbrt.kernel.fba.comp that return OptSense
 OptSense RxnDeletionComputer.getOptimizationSense()
          Returns the current optimization sense.
 OptSense FbaOptException.getSense()
          Returns the sense, or direction, of the attempted optimization.
 

Methods in sbrt.kernel.fba.comp with parameters of type OptSense
 FbaOptimizer.Results FbaOptimizer.getOptimal(MathExpr<?> objective, OptSense sense)
          Returns the results of computing the optimal value of the provided objective function.
 FbaOptimizer.Results FbaOptimizer.getOptimal(java.lang.String reactionName, OptSense sense)
          Returns the results of computing the optimal flux of the reaction with the provided name.
 void RxnDeletionComputer.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 

Constructors in sbrt.kernel.fba.comp with parameters of type OptSense
FbaOptException(MathExpr<?> objectiveFunction, OptSense sense, ProgramSolverStatus status)
          Constructs a new FBA optimization exception.
FbaOptException(MathExpr<?> objectiveFunction, OptSense sense, ProgramSolverStatus status, java.lang.String message)
          Constructs a new FBA optimization exception.
 

Uses of OptSense in sbrt.kernel.fba.proc
 

Methods in sbrt.kernel.fba.proc that return OptSense
 OptSense CvFbaOptProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptSense CatalystDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptSense RxnDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptSense CvRxnDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptSense FbaOptProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptSense CvObjectiveFunctionProcess.getOptimizationSense()
          Returns the current optimization sense.
 OptSense ObjFunAnalysis.getOptimizationSense()
          Returns the current optimization sense.
 OptSense CvCatalystDeletionProcess.getOptimizationSense()
          Returns the current optimization sense.
 

Methods in sbrt.kernel.fba.proc with parameters of type OptSense
 void CvFbaOptProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void CatalystDeletionProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void RxnDeletionProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void CvRxnDeletionProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void FbaOptProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void CvObjectiveFunctionProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void ObjFunAnalysis.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 void CvCatalystDeletionProcess.setOptimizationSense(OptSense sense)
          Sets the optimization sense to the provided value.
 

Uses of OptSense in sbrt.kernel.math.optimization
 

Methods in sbrt.kernel.math.optimization that return OptSense
static OptSense OptSense.valueOf(java.lang.String name)
          Returns the enum constant of this type with the specified name.
static OptSense[] OptSense.values()
          Returns an array containing the constants of this enum type, in the order they are declared.
 

Methods in sbrt.kernel.math.optimization with parameters of type OptSense
 void LinearProgramSolver.setObjectiveFunction(LinearComb<? extends C> expression, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void ProgramSolver.setObjectiveFunction(MathExpr<? extends C> expression, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void QuadraticProgramSolver.setObjectiveFunction(QuadraticExpr<? extends C> expression, OptSense sense)
          Sets the objective function and optimization sense to the provided values.
 void ProgramSolver.setOptimizationSense(OptSense sense)
          Sets the optimization sense.
 

Uses of OptSense in sbrt.shell.mng.fba
 

Methods in sbrt.shell.mng.fba that return OptSense
static OptSense FbaOptManager.getOptSense(ManagerInput<java.lang.String,java.lang.String> input)
          Parses and returns the value for FbaOptManager.OPTIMIZATION_SENSE in the provided manager input.
 

Uses of OptSense in sbrt.shell.text.math
 

Methods in sbrt.shell.text.math that return OptSense
 OptSense SenseFormat.parse(java.lang.String source)
          Parses the provided string and returns its corresponding object.
 

Methods in sbrt.shell.text.math with parameters of type OptSense
 java.lang.String SenseFormat.format(OptSense obj)
          Returns a formatted string representation of the provided optimization sense.