Publications 2021

  • Aguirre-Fernández G., Barbieri C., Graff A., Pérez de Arce J., Moreno H., Sánchez-Villagra MR. (2021). Cultural macroevolution of musical instruments in South America. Humanities & Social Sciences Communications, 8:208. DOI: 10.1057/s41599-021-00881-z
  • Kim I-W., Stuecker MF., Timmermann A., Zeller E., Kug J-S., Park S-W., Kim J-S. (2021). Tropical Indo-Pacific SST influences on vegetation variability in eastern Africa. Scientific Reports, 11(1):10462. DOI: 10.1038/s41598-021-89824-x
  • Leigh DM., Lischer HEL., Guillaume F., Grossen C., Günther T. (2021). Disentangling adaptation from drift in bottlenecked and reintroduced populations of Alpine ibex. Molecular Ecology Resources, 21(7):2350-2363. DOI: 10.1111/1755-0998.13442
  • Vitasse Y., Ursenbacher S., Klein G., Bohnenstengel T., Chittaro Y., Delestrade A., Monnerat C., Rebetez M., Rixen C., Strebel N., Schmidt BR., Wipf S., Wohlgemuth T., Yoccoz NG., Lenoir J. (2021). Phenological and elevational shifts of plants, animals and fungi under climate change in the European Alps. Biological Reviews of the Cambridge Philosophical Society, 96(5):1816-1835. DOI: 10.1111/brv.12727
  • Ogden R., Vasiljevic N., Prost S. (2021). Nanopore sequencing in non-human forensic genetics. Emerging Topics in Life Sciences, 5(3):465-473. DOI: 10.1042/etls20200287
  • Dickel L., Arcese P., Nietlisbach P., Keller LF., Jensen H., Reid JM. (2021). ⁠Are immigrants outbred and unrelated? Testing standard assumptions in a wild metapopulation. Molecular Ecology:Epub ahead of print. DOI: 10.1111/mec.16173
  • Cozzi G., Hollerbach L., Suter SM., Reiners TE., Kunz F., Tettamanti F., Ozgul A. (2021). Eyes, ears, or nose? Comparison of three non-invasive methods to survey wolf recolonisation. Mammalian Biology - Zeitschrift für Säugetierkunde:Epub ahead of print. DOI: 10.1007/s42991-021-00167-6
  • Halstead-Nussloch G., Tanaka T., Copetti D., Paape T., Kobayashi F., Hatakeyama M., Kanamori H., Wu J., Mascher M., Kawaura K., Shimizu KK., Handa H. (2021). Multiple Wheat Genomes Reveal Novel Gli-2 Sublocus Location and Variation of Celiac Disease Epitopes in Duplicated α-Gliadin Genes. Frontiers in Plant Science, 12:Epub-Epub. DOI: 10.3389/fpls.2021.715985
  • Herbst CT., Nishimura T., Garcia M., Migimatsu K., Tokuda IT. (2021). Effect of Ventricular Folds on Vocalization Fundamental Frequency in Domestic Pigs (Sus scrofa domesticus). Journal of Voice, 35(5):805.e1-805.e15. DOI: 10.1016/j.jvoice.2020.01.013
  • Cruickshank SS., Bergamini A., Schmidt BR. (2021). Estimation of breeding probability can make monitoring data more revealing: a case study of amphibians. Ecological Applications, 31(6):e02357. DOI: 10.1002/eap.2357
  • Demont M., Ward PI., Blanckenhorn WU., Lüpold S., Martin OY., Bussière LF. (2021). How biases in sperm storage relate to sperm use during oviposition in female yellow dung flies. Behavioral Ecology:Epub ahead of print. DOI: 10.1093/beheco/arab026
  • Van der Weyde LK., Tobler MW., Gielen MC., Cozzi G., Weise FJ., et al. (2021). Collaboration for conservation: Assessing countrywide carnivore occupancy dynamics from sparse data. Diversity and Distributions:Epub ahead of print. DOI: 10.1111/ddi.13386
  • Frei D., Veekman E., Grogg D., Stoffel-Studer I., Morishima A., Shimizu-Inatsugi R., Yates S., Shimizu KK., Frey JE., Studer B., Copetti D. (2021). Ultralong Oxford Nanopore reads enable the development of a reference-grade perennial ryegrass genome assembly. Genome Biology and Evolution:Epub ahead of print. DOI: 10.1093/gbe/evab159
  • De Nardo AN., Roy J., Sbilordo SH., Lüpold S. (2021). Condition‐dependent interaction between mating success and competitive fertilization success in Drosophila melanogaster. Evolution, 75(8):2014-2026. DOI: 10.1111/evo.14228
  • Lham D., Cozzi G., Sommer S., Wangchuk S., Lham K., Ozgul A. (2021). Ecological determinants of livestock depredation by the snow leopard Panthera uncia in Bhutan. Journal of Zoology, 314(4):275-284. DOI: 10.1111/jzo.12883
  • Matsumae H., Ranacher P., Savage PE., Blasi DE., Currie TE., Koganebuchi K., Nishida N., Sato T., Tanabe H., Tajima A., Brown S., Stoneking M., Shimizu KK., Oota H., Bickel B. (2021). Exploring correlations in genetic and cultural variation across language families in northeast Asia. Science Advances, 7(34):eabd9223. DOI: 10.1126/sciadv.abd9223
  • Kang J-H., Hwang H., Lee S-J., Choi S-D., Kim J-S., Hong Sangbum; Hur SD., Baek J-H. (2021). Record of North American boreal forest fires in northwest Greenland snow. Chemosphere, 276:130187. DOI: 10.1016/j.chemosphere.2021.130187
  • Li X-Y., Kokko H. (2021). Sexual dimorphism driven by intersexual resource competition: why is it rare, and where to look for it? Journal of Animal Ecology, 90(8):1831-1843. DOI: 10.1111/1365-2656.13487
  • Schanz FR., Sommer S., Lami A., Fontaneto D., Ozgul A. (2021). Life‐history responses of a freshwater rotifer to copper pollution. Ecology and Evolution, 11(16):10947-10955. DOI: 10.1002/ece3.7877
  • Toda Y., Tameshige T., Tomiyama M., Kinoshita T., Shimizu KK. (2021). An Affordable Image-Analysis Platform to Accelerate Stomatal Phenotyping During Microscopic Observation. Frontiers in Plant Science, 12:Epub-Epub. DOI: 10.3389/fpls.2021.715309
  • Çilingir FG., Hansen DM., Ozgul A., Grossen C. (2021). Design of SNP markers for Aldabra giant tortoises using low coverage ddRAD-seq. Conservation Genetics Resources:Epub ahead of print. DOI: 10.1007/s12686-021-01225-
  • Harrison ND., Maag N., Haverkamp PJ., Ganswindt A., Manser MB., Clutton-Brock TH., Ozgul A., Cozzi G. (2021). Behavioural change during dispersal and its relationship to survival and reproduction in a cooperative breeder. Journal of Animal Ecology:Epub ahead of print. DOI: 10.1111/1365-2656.13569
  • Guillén-Escribà C., Schneider FD., Schmid B., Tedder A., Morsdorf F., Furrer R., Hueni A., Niklaus PA., Schaepman ME. (2021). Remotely sensed between‐individual functional trait variation in a temperate forest. Ecology and Evolution:Epub ahead of print. DOI: 10.1002/ece3.7758
  • Brügger RK., Burkart JM. (2021). Parental reactions to a dying marmoset infant: conditional investment by the mother, but not the father. Behaviour:Epub ahead of print. DOI: 10.1163/1568539x-bja10108
  • Hirota SK., Yasumoto AA., Nitta K., Tagane M., Miki N., Suyama Y., Yahara T. (2021). Evolutionary history of Hemerocallis in Japan inferred from chloroplast and nuclear phylogenies and levels of interspecific gene flow. Molecular Phylogenetics and Evolution:Epub-Epub. DOI: 10.1016/j.ympev.2021.1072641016/j.ympev.2021.107264
  • Kessler C., Brambilla A., Waldvogel D., Camenisch G., Biebach I., Leigh DM., Grossen C., Croll D. (2021). A robust sequencing assay of a thousand amplicons for the high‐throughput population monitoring of Alpine ibex immunogenetics. Molecular Ecology Resources:Epub ahead of print. DOI: 10.1111/1755-0998.13452
  • Farine DR. (2021). Collective behaviour: Movement rules under imminent threat. Current Biology, 31(14):R902-R904. DOI: 10.1016/j.cub.2021.05.043
  • Van Buskirk J., Smith DC. (2021). Ecological causes of fluctuating natural selection on habitat choice in an amphibian. Evolution, 75(7):1862-1877. DOI: 10.1111/evo.14282
  • Watson SK., Burkart JM., Schapiro SJ., Lambeth SP., Mueller JL., Townsend SW. (2021). Reply to comment on “Nonadjacent dependency processing in monkeys, apes, and humans”. Science Advances, 7(30):eabj1517. DOI: 10.1126/sciadv.abj1517
  • Bond ML., König B., Ozgul A., Farine DR., Lee DE. (2021). Socially defined subpopulations reveal demographic variation in a giraffe metapopulation. Journal of Wildlife Management, 85(5):920-931. DOI: 10.1002/jwmg.22044
  • Susi H., Laine A-L. (2021). Agricultural land use disrupts biodiversity mediation of virus infections in wild plant populations. New Phytologist, 230(6):2447-2458. DOI: 10.1111/nph.17156
  • Heinen VK., Pitera AM., Sonnenberg BR., Benedict LM., Bridge ES., Farine DR., Pravosudov VV. (2021). Food discovery is associated with different reliance on social learning and lower cognitive flexibility across environments in a food-caching bird. Proceedings of the Royal Society of London, Series B: Biological Sciences, 288(1951):20202843. DOI: 10.1098/rspb.2020.2843
  • Schlebusch CM., Loog L., Groucutt HS., King T., Rutherford A., Barbieri C., Barbujani G., Chikhi L., Stringer C., Jakobsson M., Eriksson A., Manica A., Tishkoff SA., Scerri EML., Scally A., Brierley C., Thomas MG. (2021). Human origins in Southern African palaeo-wetlands? Strong claims from weak evidence. Journal of Archaeological Science, 130:105374. DOI: 10.1016/j.jas.2021.105374
  • Runge J-N., Lindholm AK. (2021). Experiments confirm a dispersive phenotype associated with a natural gene drive system. Royal Society Open Science, 8(5):rsos.202050. DOI: 10.1098/rsos.202050
  • Schmidt BR., Băncilă RI., Hartel T., Grossenbacher K., Schaub M. (2021). Shifts in amphibian population dynamics in response to a change in the predator community. Ecosphere, 12(5):e03528. DOI: 10.1002/ecs2.3528
  • Zanet S., Ferroglio E., Orlandini F., Bassano B., Battisti E., Brambilla A. (2021). Bronchopulmonary Nematodes in Alpine Ibex: Shedding of First Stage Larvae Analyzed at the Individual Host Level. Frontiers in Veterinary Science, 8:663268. DOI: 10.3389/fvets.2021.663268
  • Reuland C., Simmons LW., Lüpold S., Fitzpatrick JL. (2021). Weapons evolve faster than sperm in bovids and cervids. Cells, 10(5):1062. DOI: 10.3390/cells10051062
  • Bachmann JC., Van Buskirk J. (2021). Adaptation to elevation but limited local adaptation in an amphibian. Evolution, 75(4):956-969. DOI: 10.1111/evo.14109
  • Yannic G., Helfer V., Sermier R., Schmidt BR., Fumagalli L. (2021). Fine scale genetic structure in fire salamanders (Salamandra salamandra) along a rural-to-urban gradient. Conservation Genetics, 22(2):275-292. DOI: 10.1007/s10592-021-01335-4
  • Shimizu-Inatsugi R., Milosavljevic S., Shimizu KK., Schaepman-Strub G., Tanoi K., Sato Y. (2021). Metal accumulation and its effect on leaf herbivory in an allopolyploid species Arabidopsis kamchatica inherited from a diploid hyperaccumulator A. halleri. Plant Species Biology, 36(2):208-217. DOI: 10.1111/1442-1984.12304
  • Sato Y., Yamamoto E., Shimizu KK., Nagano AJ. (2021). Neighbor GWAS: incorporating neighbor genotypic identity into genome-wide association studies of field herbivory. Heredity, 126(4):597-614. DOI: 10.1038/s41437-020-00401-w
  • Valenzuela-Sánchez A., Wilber MQ., Canessa S., Bacigalupe LD., Muths E., Schmidt BR., Cunningham AA., Ozgul A., Johnson PTJ., Cayuela H. (2021). Why disease ecology needs life‐history theory: a host perspective. Ecology Letters, 24(4):876-890. DOI: 10.1111/ele.13681
  • Shimizu KK., Copetti D., Okada M., Wicker T., Tameshige T., Hatakeyama M., Shimizu-Inatsugi R., Aquino C., et al. (2021). De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium Resistance Genes in East Asian Genotypes. Plant & Cell Physiology, 62(1):8-27. DOI: 10.1093/pcp/pcaa152
  • Mohanraj U., Jokinen M., Thapa RR., Paloniemi M., Vesikari T., Lappalainen M., Tarkka E., Nora-Krūkle Z., Vilmane A., Vettenranta K., Mangani C., Oikarinen S., Fan Y-M., Ashorn P., Väisänen E., Söderlund-Venermo M. (2021). Human Protoparvovirus DNA and IgG in Children and Adults with and without Respiratory or Gastrointestinal Infections. Viruses, 13(3):483. DOI: 10.3390/v13030483
  • Höckerstedt L., Susi H., Laine A-L. (2021). Effect of maternal infection on progeny growth and resistance mediated by maternal genotype and nutrient availability. Journal of Ecology, 109(3):1439-1451. DOI: 10.1111/1365-2745.13568
  • Akiyama R., Sun J., Hatakeyama M., Lischer HEL., Briskine RV., Hay A., Gan X., Tsiantis M., Kudoh H., Kanaoka MM., Sese J., Shimizu K., Shimizu-Inatsugi R. (2021). Fine-scale empirical data on niche divergence and homeolog expression patterns in an allopolyploid and its diploid progenitor species. New Phytologist, 229(6):3587-3601. DOI: 10.1111/nph.17101
  • Schrader J., Craven D., Sattler C., Cámara‐Leret R., Moeljono S., Kreft H. (2021). Life-history dimensions indicate non-random assembly processes in tropical island tree communities. Ecography, 44(3):469-480. DOI:10.1111/ecog.05363
  • Sapage M., Varela SAM., Kokko H. (2021). Social learning by mate-choice copying increases dispersal and reduces location adaptation. Functional Ecology, 35(3):705-716. DOI:10.1111/1365-2435.13735
  • Chevalier M., Mod H., Broennimann O., Di Cola V., Schmid S., Niculita-Hirzel H., Pradervand J-N., Schmidt BR., Ursenbacher S., Pellissier L., Guisan A. (2021). Low spatial autocorrelation in mountain biodiversity data and model residuals. Ecosphere, 12(3):e03403. DOI: 10.1002/ecs2.3403
  • Schmidt BR. (2021). Welche Faktoren beeinflussen die Wanderungen von Amphibien von einer Population zur anderen?. Zeitschrift für Feldherpetologie, 28(1):1-12. No Open Access.
  • Evans JC., Lindholm AK., Koenig B. (2021). Long-term overlap of social and genetic structure in free-ranging house mice reveals dynamic seasonal and group size effects. Current Zoology, 67(1):59-69. DOI: 10.1093/cz/zoaa030
  • Maechler E., Salvani A., Walser J-C., Larsen A., Schaefli B., Altermatt F., Ceperley N. (2021). Environmental DNA simultaneously informs hydrological and biodiversity characterization of an Alpine catchment. Hydrology and Earth System Sciences Discussions, 25(2):735-753. DOI:10.5194/hess-25-735-2021
  • Bond ML., Lee DE., Farine DR., Ozgul A., Koenig B. (2021). Sociability increases survival of adult emale giraffes. Proceedings of the Royal Society of London, Series B: Biological Sciences, 288(1944):20202770. DOI: 10.1098/rspb.2020.2770
  • Gerber N., Auclair Y., Koenig B., Lindholm AK.(2021). Population Density and Temperature Influence the Return on Maternal Investment in Wild House Mice. Frontiers in Ecology and Evolution, 8:602359. DOI: 10.3389/fevo.2020.602359
  • Băncilă RI., Plăiaşu R., Stănescu F., Schmidt BR., Nae I., Denoël M. (2021). Food level and light conditions affect the antipredator behavior in larvae of a stream-breeding amphibian. Behavioral Ecology and Sociobiology, 75(2):36. DOI: 10.1007/s00265-021-02966-w
  • Reid JM., Arcese P., Nietlisbach P., Wolak ME., Muff S., Dickel L., Keller LF. (2021). Immigration counter-acts local micro-evolution of a major fitness component: Migration-selection balance in free-living song sparrows. Evolution Letters, 5(1):48-60. DOI:10.1002/evl3.214
  • Kaarlejaervi E., Salemaa M., Tonteri T., Meilae P., Laine A-L. (2021). Temporal biodiversity change following disturbance varies along an environmental gradient. Global Ecology and Biogeography, 30(2):476-489. DOI:10.1111/geb.13233
  • Obrecht A., Pham-Trffert M., Spehn EM., Payne D., de Bremont A., Altermantt F., Fischer M., Passarello C., Moesberger H., Schelske O., Guntern J., Prescott G., Geschke J. (2021). Achieving the SDGs with Biodiversity. Swiss Academies Factsheets, 16(1):1-11. DOI:10.5281/zenodo.4457298
  • Obrecht A., Pham-Trffert M., Spehn EM., Payne D., de Bremont A., Altermantt F., Fischer M., Passarello C., Moesberger H., Schelske O., Guntern J., Prescott G., Geschke J. (2021). Mit Biodiversität die SDGs erreichen. Swiss Academies Factsheets, 16(1):1-11. DOI:10.5281/zenodo.4457329
  • Evans JC., Lindholm AK., Koenig B. (2021). Family dynamics reveal that female house mice preferentially breed in their maternal community. Dissertation, University of Zurich. DOI: 10.1101/2021.01.29.428775
  • van Moorsel SJ., Hahl T., Petchey O., Ebeling A., Eisenhauer N., Schmid B., Wagg C. (2021). Co-occurence history increases ecosystem stability and resilience in experimental plant communitier. Ecology, 102(1):e03205. DOI:10.1002/ecy.3205
  • Plekhanova E., Niklaus PA., Gastellu-Etchegorry J-P., Schaepman-Strub G. (2021). How does leaf functional diversity affect the light environment in forest canopies? An in-silico biodiversity experiment. Ecological Modelling, 440:109394. DOI:10.1016/j.ecolmodel.2020.109394
  • Carraro L., Stauffer JB., Altermatt F. (2021). How to design optimal eDNA sampling strategies for biomonitoring in river networks. Environmental DNA, 3(1):157-172. DOI: 10.1002/edn3.137
  • Bond ML., Koenig B., Lee DE., Ozgul A., Farine DR. (2021). Proximity to humans affects local social structure in a giraffe metapopulation. Journal of Animal Ecology, 90(1):212-221. DOI: 10.1111/1365-2656.13247
  • Rouka E., Gourgoulianni N., Lüpold S., Hatzoglou C., Gourgoulianis K., Blanckenhorn WU., Zarogiannis SG. (2021). The Drosophila septate junctions beyond barrier function: Review of the literature, prediction of human orthologs of the SJ‐related proteins and identification of protein domain families. Acta Physiologica, 231(1):e13527. DOI: 10.1111/apha.13527
  • Rauber R., Manser MB. (2021). Effect of group size and experience on the ontogeny of sentinel calling behaviour in meerkats. Animal Behaviour, 171:129-138. DOI:10.1016/j.anbehav.2020.11.014
  • Vasiljevic N., Lim M., Humble E., Seah A., Kratzer A., Morf NV., Prost S., Ogden R. (2021). Developmental validation of Oxford Nanopore Technology MinION sequence data and the NGSpeciesID bioinformatic pipeline for forensic genetic species identification. Forensic Science International. Genetics, 53:102493. DOI:10.1016/j.fsigen.2021.102493
  • Tamir D. (2021). Fats and Spirits: A Story of Modern Humanities’ Energy Dependence. In: Mišík, Matúš; Kujundzic, Nada. Energy Humanities : Current State and Future Directions. Cham: Springer, 37-51. DOI: 10.1007/978-3-030-57480-2_3
  • Bardier C., Székely D., Augusto-Alves G., Matínez-Latorraca N., Schmidt BR., Cruickshank SS. (2021). Performance of visual vs. software-assisted photo-identification in mark-recapture studies: a case study examining different life stages of the Pacific Horned Frog (Ceratophrys stolzmanni). Amphibia - Reptilia, 42(1):17-28. DOI: 10.1163/15685381-bja10025